BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036D11LP1|AL430228
(920 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1799 1750 0.0
>3x_Contig1799
Length = 39855
Score = 1750 bits (878), Expect = 0.0
Identities = 906/918 (98%), Gaps = 2/918 (0%)
Strand = Plus / Minus
Query: 1 aagccttatcgtttgaactattacgaaaacagtagacagaagcatcaagtagactatgat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15374 aagccttatcgtttgaactattacgaaaacagtagacagaagcatcaagtagactatgat 15315
Query: 61 cttcttcattggcgttgtaagccatccgcccttagacctgccatggccctgtgtattata 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15314 cttcttcattggcgttgtaagccatccgcccttagacctgccatggccctgtgtattata 15255
Query: 121 gcgaggtaacaaatcgttaccgcgacgaattcctccttgcataataataaaataagagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15254 gcgaggtaacaaatcgttaccgcgacgaattcctccttgcataataataaaataagagta 15195
Query: 181 gttcagtaagccctaaacaagttaaatgaaacacgatagcvagaataatgcttcacaata 240
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 15194 gttcagtaagccctaaacaagttaaatgaaacacgatagcaagaataatgcttcacaata 15135
Query: 241 ctgattctctatacctggccacgaagtaccaacgaatgaaccgatatttcaaacccattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15134 ctgattctctatacctggccacgaagtaccaacgaatgaaccgatatttcaaacccattg 15075
Query: 301 aacatagtcaacaatatccatagactatcaccataccaaagtacatgattagattccttt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15074 aacatagtcaacaatatccatagactatcaccataccaaagtacatgattagattccttt 15015
Query: 361 gttactttgacaaaaaaaaaaccgttctggatattcgaacgggaaaactgtgacaagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 15014 gttactttgacaaaaaaaaaaccgttctggatattcgaacgggaaaactgtgacaagaag 14955
Query: 421 tccaggccgattaatcatggtttgtttttgccgttcagtatgtggtgtacgaatgtatag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14954 tccaggccgattaatcatggtttgtttttgccgttcagtatgtggtgtacgaatgtatag 14895
Query: 481 agtgtatagtggcacataatcggatacaaaggttgcgtaggcgttgtaaactggactatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14894 agtgtatagtggcacataatcggatacaaaggttgcgtaggcgttgtaaactggactatc 14835
Query: 541 aaggttcaaccggtcatgagtccatgtaatctgccctcacaacctacagcgtcgtcttta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14834 aaggttcaaccggtcatgagtccatgtaatctgccctcacaacctacagcgtcgtcttta 14775
Query: 601 tctatggctttgtgtggcttattttttgttatgtatttacagtactaaatattgggtcga 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14774 tctatggctttgtgtggcttattttttgttatgtatttacagtactaaatattgggtcga 14715
Query: 661 aattctctgaattctgacttacttcagacaactgattgacttaattaaactatttaaaaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14714 aattctctgaattctgacttacttcagacaactgattgacttaattaaactatttaaaaa 14655
Query: 721 tgtgattataaaataagtttttaagtgagagataacccattttgcaaaggcaaataaagg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 14654 tgtgattataaaataagtttttaagtgagagataacccattttgcaaaggcaaataaagg 14595
Query: 781 gtagaggaagacggatttacttatcaattagcttggtatcwttgtgataawtacgatamt 840
|||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||| |
Sbjct: 14594 gtagaggaagacggatttacttatcaattagcttggtatcattgtgataattacgatact 14535
Query: 841 caatamacmaamgtactgtccggaggaaaaaaaa-ggctctgggtcggtatgagtatgg- 898
|||| || || |||||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 14534 aaataaacaaacgtactgtccggaggaaaaaaaatggctctgggtcggtatgagtctgga 14475
Query: 899 aaccgaggctcwtatact 916
||||||||||| ||||||
Sbjct: 14474 aaccgaggctcttatact 14457
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6987
Number of Sequences: 1807
Number of extensions: 6987
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 920
length of database: 10,358,551
effective HSP length: 16
effective length of query: 904
effective length of database: 10,329,639
effective search space: 9337993656
effective search space used: 9337993656
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)